Insertion junction: LMJ.RY0402.085253_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.085253
Chromosome:chromosome 17
Location:2490116
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g716050 (1 of 1) PTHR20953:SF2 - PROTEIN SEEDLING PLASTID DEVELOPMENT 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAGAGGAGGGAGGCGAGAGGGTATCTG
Internal bar code:TGAACACTTACCCTATGCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:96.791
LEAP-Seq n confirming:6485
LEAP-Seq n nonconfirming:215
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGAGGCAGAGGAAGATG
Suggested primer 2:CCAGCCCAAACTAAACCAAA