Insertion junction: LMJ.RY0402.085553_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.085553
Chromosome:chromosome 1
Location:6560240
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g046850 UBC13 E2 Ubiquitin conjugating enzyme; (1 of 1) K04649 - ubiquitin-conjugating enzyme (huntingtin interacting protein 2) (HIP2, UBC1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGGTGTTGGAGGGTGTAATACGGTA
Internal bar code:GAGGGTGAAGGCCTACTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:629
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGCAGGTGATAGCAGA
Suggested primer 2:CCATGGGATGGTGTGTATCA