Insertion junction: LMJ.RY0402.085564_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.085564
Chromosome:chromosome 9
Location:2117495
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGTTTAGCTAATGTACCCCTAAATCAT
Internal bar code:CCAGATCTGCGATGGCGTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:931
LEAP-Seq percent confirming:99.7602
LEAP-Seq n confirming:1248
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCCAGCAGACTAGGTG
Suggested primer 2:GTGTACTTCGGCACCTGGAT