Insertion junction: LMJ.RY0402.085686_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.085686
Chromosome:chromosome 6
Location:3932679
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278186 (1 of 1) IPR000157//IPR011251//IPR016024 - Toll/interleukin-1 receptor homology (TIR) domain // Luciferase-like domain // Armadillo-type fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAATCACATTTAAATGCGTACAATATGC
Internal bar code:AGGACCAACGGTAGAAGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:257
LEAP-Seq percent confirming:57.0025
LEAP-Seq n confirming:232
LEAP-Seq n nonconfirming:175
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGACAGCAAGTGCCTTA
Suggested primer 2:GAGCAGGCTGAAAGATGGTC