Insertion junction: LMJ.RY0402.085821_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.085821
Chromosome:chromosome 12
Location:5594000
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g531900 FLVA,FLVA1 (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACGGGTGAGGGCTGGCTGCGCGAGTG
Internal bar code:CGTTTATGGAGGTGGCCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:99.0318
LEAP-Seq n confirming:716
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTTGAGGCTTTCATTG
Suggested primer 2:CTGACGCACATCATCCTGAC