Insertion junction: LMJ.RY0402.085875_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.085875
Chromosome:chromosome 9
Location:2953861
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g387850 RWP13 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCATGACTGCCCACGTTCGCGCCACAA
Internal bar code:CCGGGTTCTAGCTGTACAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:74.8387
LEAP-Seq n confirming:116
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCAGCAGCGCCATAC
Suggested primer 2:CTCAACCATAGAGCTTCGGC