Insertion junction: LMJ.RY0402.085971_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.085971
Chromosome:chromosome 3
Location:4478785
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176000 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTATAAGGTTCGACGGTCCATCCGTCCCT
Internal bar code:GACCCAACGTTACCTCTTGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:91.0349
LEAP-Seq n confirming:3158
LEAP-Seq n nonconfirming:311
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGCTAGTCATTGCCCTTA
Suggested primer 2:AGCCAGACGAGCTCAAGAAG