Insertion junction: LMJ.RY0402.086104_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.086104
Chromosome:chromosome 2
Location:1868972
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g087551 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTCCTCCTGGCCCCAGCCTCCCAAC
Internal bar code:GGCCCTCAGTTTTGGACGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:214
LEAP-Seq percent confirming:84.9057
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTAAACAACACGTTCG
Suggested primer 2:GTGGGATGGAGGTGAGCTT