Insertion junction: LMJ.RY0402.086197_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.086197
Chromosome:chromosome 16
Location:2526915
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g661150 CGL5 Conserved in the Green Lineage; (1 of 2) 5.2.1.14 - Beta-carotene isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTCAAAGCACTGTCCGAGACCATCTACA
Internal bar code:CGCCGGATGTGCGATCAACCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTAGGCATGAGCGAGTT
Suggested primer 2:CTGTTCTCCAGAAAGACGCC