Insertion junction: LMJ.RY0402.086251_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.086251
Chromosome:chromosome 8
Location:3725414
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g377050 (1 of 1) 4.6.1.14 - Glycosylphosphatidylinositol diacylglycerol-lyase / VSG-lipase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGATCGGCTGGTCCACGGCGAAATCACC
Internal bar code:TACGTGCACCAGGCTTCAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:364
LEAP-Seq percent confirming:99.6095
LEAP-Seq n confirming:7652
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTACGAGACGTGCTGAG
Suggested primer 2:TGGTCAGCTATCGTCACTGC