Insertion junction: LMJ.RY0402.086251_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086251
Chromosome:chromosome 8
Location:3725416
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g377050 (1 of 1) 4.6.1.14 - Glycosylphosphatidylinositol diacylglycerol-lyase / VSG-lipase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAAATGTGGAGCCGGCCATAGTTCTTG
Internal bar code:GCCTGATACTAATGAGGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:828
LEAP-Seq percent confirming:99.6714
LEAP-Seq n confirming:910
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTACGAGACGTGCTGAG
Suggested primer 2:TGGTCAGCTATCGTCACTGC