Insertion junction: LMJ.RY0402.086312_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086312
Chromosome:chromosome 6
Location:100988
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g249700 (1 of 1) IPR003690//IPR017956//IPR020478 - Mitochodrial transcription termination factor // AT hook, DNA-binding motif // AT hook-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCGATGTGTCATGTGTCAAGGATCATG
Internal bar code:ACGGGCGGAAAGGGACTGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:74.5819
LEAP-Seq n confirming:669
LEAP-Seq n nonconfirming:228
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTAGCTGTGGACGCGTATC
Suggested primer 2:TGGACAGTGTATCTGCAGCC