Insertion junction: LMJ.RY0402.086380_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.086380
Chromosome:chromosome 2
Location:469200
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g076600 Putative chloroplast localized Peptidyl-tRNA hydrolase; (1 of 1) K01056 - peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] (PTH1, pth, spoVC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCGAGTCACACCAGTCCCCTCCTTGCC
Internal bar code:GTGGAATATAAGTCGGCGGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1017
LEAP-Seq percent confirming:99.7893
LEAP-Seq n confirming:7578
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCAGCCGCATCAGACTA
Suggested primer 2:GTGAAGCCGGTAACGTTCAT