Insertion junction: LMJ.RY0402.086501_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.086501
Chromosome:chromosome 13
Location:5037732
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g606950 5'UTR
Cre13.g606962 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACTTTCCGGCCAGCGAGCCGAGTCCAG
Internal bar code:GCCTATGTTCGCGCAGGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:99.2737
LEAP-Seq n confirming:10525
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CACAATAACGCCACGAACAC
Suggested primer 2:GATATAGCTCGCGCAGGAAG