Insertion junction: LMJ.RY0402.086501_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086501
Chromosome:chromosome 13
Location:5037735
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g606950 5'UTR
Cre13.g606962 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGTCGACTGGCGTTGGCTCGTTCGAA
Internal bar code:GCAGGATGGGCTGGATCGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:98.934
LEAP-Seq n confirming:1485
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CACAATAACGCCACGAACAC
Suggested primer 2:GATATAGCTCGCGCAGGAAG