Insertion junction: LMJ.RY0402.086506_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086506
Chromosome:chromosome 1
Location:3990986
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g025950 PPR8 (1 of 1) IPR000209//IPR002885 - Peptidase S8/S53 domain // Pentatricopeptide repeat; PentatricoPeptide Repeat protein 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGCCGCATGGACCGCCGCATACAGCG
Internal bar code:CCCGTCGTTAGGACACCAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:34
LEAP-Seq percent confirming:98.3051
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAACACATACACCTGCC
Suggested primer 2:CAGGCAGCACAAGGTAACAA