Insertion junction: LMJ.RY0402.086549_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086549
Chromosome:chromosome 3
Location:3288133
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g166000 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGCATGGCGCACCGACGGCGGATGAGTG
Internal bar code:TGGCCCTTGAAAGAAGGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:64.5733
LEAP-Seq n confirming:401
LEAP-Seq n nonconfirming:220
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGATGGGGGACTGAGA
Suggested primer 2:CAGTGAGTCCTAGCCAAGCC