Insertion junction: LMJ.RY0402.086839_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.086839
Chromosome:chromosome 12
Location:8517682
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g547800 SNE15 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; NAD dependent epimerase/dehydratase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTATGTCAACCATGGCTTTTGCTATAGCC
Internal bar code:TGTCGACTGATCTGCACTCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:85.3134
LEAP-Seq n confirming:4804
LEAP-Seq n nonconfirming:827
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GACACTTGGACTCGTGCTCA
Suggested primer 2:CTTACTTGCCTTCAGCGTCC