Insertion junction: LMJ.RY0402.086979_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.086979
Chromosome:chromosome 1
Location:3136751
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g019550 ankryin repeat containing protein; (1 of 2) PTHR24128:SF17 - E3 UBIQUITIN-PROTEIN LIGASE XBAT32 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCATTGTGAGCTGTTGTTGATTGTCC
Internal bar code:CGCGTCTGTCAAGTTCGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:129
LEAP-Seq percent confirming:57.76
LEAP-Seq n confirming:361
LEAP-Seq n nonconfirming:264
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGCTGAAAGCAAACGTC
Suggested primer 2:CACGGAGCTCCCACTAAAAA