Insertion junction: LMJ.RY0402.087318_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.087318
Chromosome:chromosome 13
Location:3653426
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g588736 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAACGGGATTTCGCTATTCATTATTTC
Internal bar code:TTTCTCGTTTGGTATGACTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:98.9962
LEAP-Seq n confirming:789
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACTATGTGGCTCAGCAG
Suggested primer 2:GCTGTTGTTGTTGCTGCTGT