Insertion junction: LMJ.RY0402.087471_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.087471
Chromosome:chromosome 3
Location:7972469
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g201950 (1 of 1) IPR003882//IPR008752//IPR024079 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin // Metallopeptidase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCGCAACACGCCAGCAAAATAAGTTTC
Internal bar code:GCCTAACCAAGGTGTACTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:99.6488
LEAP-Seq n confirming:2837
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGATAGCCTGATGGGT
Suggested primer 2:ACTCCGACATTGCCTCATTC