Insertion junction: LMJ.RY0402.087552_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087552
Chromosome:chromosome 3
Location:6460454
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g194800 (1 of 1) K14399 - polyribonucleotide 5'-hydroxyl-kinase (CLP1, HERB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGACCCGCACCACGTGCCCATCCCAGCC
Internal bar code:GGGAGCAGTGTTTCCGAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:101
LEAP-Seq percent confirming:88.75
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATCTGAAGAAGGCGTGA
Suggested primer 2:CTTCTACGGACACTCCTCGC