Insertion junction: LMJ.RY0402.087589_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.087589
Chromosome:chromosome 13
Location:899833
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g567700 HAV,HAV2 Histone H2A variant; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGACTTTTGACCATGACCGTTAAAATC
Internal bar code:AGGGAGAGCGAGGGTCACGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:99.3186
LEAP-Seq n confirming:2915
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCGTCTCTAGCACTC
Suggested primer 2:GATTCATGGGTTGAATTCCG