Insertion junction: LMJ.RY0402.087748_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.087748
Chromosome:chromosome 12
Location:3332661
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497652 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGGCAGCAGGCACGACAAGCGGGCAG
Internal bar code:AAGTCCAGACTCCCTCTTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:99.7601
LEAP-Seq n confirming:5823
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGTCCTGTGTGAGTGC
Suggested primer 2:CAGTGAGTCCTAGCCAAGCC