Insertion junction: LMJ.RY0402.087748_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087748
Chromosome:chromosome 12
Location:3332662
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g497652 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCTCTCCCCCACAGCAAGAAGCTGGC
Internal bar code:GAGCCTTAAAGCGCACCCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:98.8266
LEAP-Seq n confirming:758
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGTCCTGTGTGAGTGC
Suggested primer 2:CAGTGAGTCCTAGCCAAGCC