Insertion junction: LMJ.RY0402.087757_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.087757
Chromosome:chromosome 9
Location:3805385
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391615 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGAAGAGGCCCATGGTCGTCAAACCTCG
Internal bar code:CCAACTTTGATCGACATCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:99.6526
LEAP-Seq n confirming:14055
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTCAGTCTGCTGTCAA
Suggested primer 2:ACGCCACATAAGAAAGGTGG