Insertion junction: LMJ.RY0402.087757_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087757
Chromosome:chromosome 9
Location:3805392
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391615 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGACACGCACGGCCAAGGCCAACGCACT
Internal bar code:GCGTGTGGCGCGAGTGTCTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:99.2233
LEAP-Seq n confirming:6132
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTTCAGTCTGCTGTCAA
Suggested primer 2:GGCGTTCGAGAGGGTACATA