Insertion junction: LMJ.RY0402.087788_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.087788
Chromosome:chromosome 16
Location:3745863
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g689150 SQD3,GTR23 Sulfoquinovosyldiacylglycerol synthase; (1 of 2) K06119 - sulfoquinovosyltransferase (SQD2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTCGCCTGCTCGTTCTCAGTCGAATGA
Internal bar code:GCTGTTCTTCCGCGCGGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1807
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCGGTATGAAGGGTTC
Suggested primer 2:TTCTACTCCTCGCCCACACT