Insertion junction: LMJ.RY0402.087814_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.087814
Chromosome:chromosome 3
Location:2718685
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTTACTTAACCGCCCAAGGGCTTACAC
Internal bar code:TGGTAGTGGATTTTTATAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:98.7421
LEAP-Seq n confirming:628
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCAGGGATATGTCGTC
Suggested primer 2:AGAAAGTGCACCCAAGCTGT