Insertion junction: LMJ.RY0402.087814_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.087814
Chromosome:chromosome 3
Location:2718687
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g161550 FAP55 (1 of 1) IPR009053//IPR023220 - Prefoldin // Type IV secretion system, VirB5-domain; Flagellar Associated Protein 55 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCAACCCATGTGACCATATCGTTGAT
Internal bar code:CCAGAATGCCTGGCCCGGGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:666
LEAP-Seq percent confirming:96.0425
LEAP-Seq n confirming:1990
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGCAGGGATATGTCGTC
Suggested primer 2:AGAAAGTGCACCCAAGCTGT