Insertion junction: LMJ.RY0402.087850_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087850
Chromosome:chromosome 16
Location:5933496
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g677000 HSP70E,GEX27 (1 of 1) K09489 - heat shock 70kDa protein 4 (HSPA4); Heat shock protein 70E 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACCCAGAGGGGTTGCGCTCAAAGTAA
Internal bar code:CGACTCGAAGGGAGTGGGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:569
LEAP-Seq percent confirming:97.5835
LEAP-Seq n confirming:1373
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GATCAAAAGCGCTGTCACAA
Suggested primer 2:GCCGCACTTTAGCTTGTTTC