Insertion junction: LMJ.RY0402.087868_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.087868
Chromosome:chromosome 9
Location:2144433
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393450 FAS10,FAP233,FLA5 Flagellar Associated Protein 233; (1 of 21) PF02469 - Fasciclin domain (Fasciclin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATGTATGGGCAGGTGGCAAACTCAGA
Internal bar code:GTTGGAGGATGCGGTGCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:864
LEAP-Seq percent confirming:99.5936
LEAP-Seq n confirming:4411
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGTCGTGTTGCCCAAAT
Suggested primer 2:TGACGTAGTCGGCGTAGTTG