Insertion junction: LMJ.RY0402.087947_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087947
Chromosome:chromosome 11
Location:2154238
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g469500 FXL6 FixL-like PAS domain protein; (1 of 12) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATGATGAGGTGTGTGCATGTGCATTGC
Internal bar code:GCGGATCCAACAGCAAGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:99.2191
LEAP-Seq n confirming:4828
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCACACGGTGAGCCTAT
Suggested primer 2:CGAGGCAGCACTGATGAATA