Insertion junction: LMJ.RY0402.088229_5

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.088229
Chromosome:chromosome 17
Location:3481360
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGACCTGGGCTGCTCCATAGCTGCGG
Internal bar code:CCCGACGTTTACGCCGGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:99.4487
LEAP-Seq n confirming:902
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACGCACAACTCCCACCT
Suggested primer 2:CGTTGTCATTGGAGAGCAGA