Insertion junction: LMJ.RY0402.088329_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.088329
Chromosome:chromosome 9
Location:4344573
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g395028 (1 of 2) PF02470 - MlaD protein (MlaD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGTGGTGCACGGTGCGTGCGCGTGGAT
Internal bar code:TGTGAGGCACATAAAGCAATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:95.879
LEAP-Seq n confirming:3327
LEAP-Seq n nonconfirming:143
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCCTCCAATTCTCCA
Suggested primer 2:AGTTGGGAGTGGGAACACAG