Insertion junction: LMJ.RY0402.088455_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.088455
Chromosome:chromosome 12
Location:3532918
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGCGCTGGCGCTCAACGGGCGCTAC
Internal bar code:GAGTCCCGGGGGGCGAGCTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:97.8102
LEAP-Seq n confirming:134
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTTGTGTGCAGCACGTC
Suggested primer 2:ACTGTGCATAGGACACGCTG