Insertion junction: LMJ.RY0402.088615_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.088615
Chromosome:chromosome 4
Location:3013780
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g225000 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGCCCAGCACCACCACCCCAATTCCT
Internal bar code:TGTGCGGGTGCCCGGAGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:122
LEAP-Seq percent confirming:93.5065
LEAP-Seq n confirming:720
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGACGGTAGGCGCTCTTG
Suggested primer 2:GGTGAGGCAAAATCCAGAAA