Insertion junction: LMJ.RY0402.088682_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.088682
Chromosome:chromosome 5
Location:961683
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g246950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGAATTGTCGGCTGCAATCCGACGTAT
Internal bar code:GACACATCTCAGTCTTAATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1101
LEAP-Seq percent confirming:96.1919
LEAP-Seq n confirming:5153
LEAP-Seq n nonconfirming:204
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AATTTGTCACAACACCGCAA
Suggested primer 2:TAAAGATGTTGGCGGAGGAG