Insertion junction: LMJ.RY0402.088712_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.088712
Chromosome:chromosome 11
Location:568753
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGGAGTGCGGTGTGGACTGGAATCA
Internal bar code:AAATACAACACAATACGGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:426
LEAP-Seq percent confirming:98.603
LEAP-Seq n confirming:847
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTACCGGTTTTGTTGGAT
Suggested primer 2:ACACACACACGGTTACGCAT