Insertion junction: LMJ.RY0402.088734_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.088734
Chromosome:chromosome 4
Location:3860402
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g230144 SPT1 Component of serine palmitoyltransferase; (1 of 1) PTHR13693//PTHR13693:SF3 - CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE // LD36009P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACAAGCTCTTCACACTCGCACAAGAATT
Internal bar code:AACCCGGCGTCAACGCAGAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:255
LEAP-Seq percent confirming:99.8492
LEAP-Seq n confirming:2649
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGAAGGCCTACATTCGC
Suggested primer 2:GTCTGAGGGTTTTGAGCAGC