Insertion junction: LMJ.RY0402.088971_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.088971
Chromosome:chromosome 5
Location:3011885
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCATAGCCTTGTATAAGTGCAATAGCAC
Internal bar code:ATTGCGCCTCCAGTAGATAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:98.6588
LEAP-Seq n confirming:1839
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TATGATGGGAAAGCTGAGGG
Suggested primer 2:GCTTCAATCTTCACCCCAAA