Insertion junction: LMJ.RY0402.089008_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089008
Chromosome:chromosome 12
Location:4098480
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g517900 SCA1,SECA1 (1 of 1) K03070 - preprotein translocase subunit SecA (secA); Chloroplast-associated SecA protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCCATAGGCAATGCGGGGCCACGAGCA
Internal bar code:CGACGCTTGAGACGCTGAACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:192
LEAP-Seq percent confirming:90.6367
LEAP-Seq n confirming:484
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGAGCGTACTGAGAGA
Suggested primer 2:TTCTTGGTGAGCTTGTGTCG