Insertion junction: LMJ.RY0402.089060_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.089060
Chromosome:chromosome 12
Location:3336284
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497653 SNE13,NED1 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Putative Cinnamoyl-CoA reductase/flavanone 4-reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTTACTCTGCTGTCCAGCACACCATG
Internal bar code:TGGTACGTTGTCTGCCATCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:99.2802
LEAP-Seq n confirming:5655
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTACATCTGGCCCTTCAGGA
Suggested primer 2:GAAACTGCTCTCAGGAACGG