Insertion junction: LMJ.RY0402.089338_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089338
Chromosome:chromosome 6
Location:4932798
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g279500 CPL6 Conserved in the Plant Lineage; (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTTTGGCAGTTGGCACTGTGGTGAGAG
Internal bar code:GGGTGTTCGCCGGGCGAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:367
LEAP-Seq percent confirming:97.0076
LEAP-Seq n confirming:4960
LEAP-Seq n nonconfirming:153
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGCGCAGTATATCAAA
Suggested primer 2:ACGAGATGAGGGGTGTTACG