Insertion junction: LMJ.RY0402.089739_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.089739
Chromosome:chromosome 12
Location:7307801
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATAACAGTTGCGGTAGGGACGACGTGCT
Internal bar code:TCCTATGGTGTTTTCATTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:92
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGTTTAAGTCTTGCCA
Suggested primer 2:AATCGCAGCCAACACATACA