Insertion junction: LMJ.RY0402.089785_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089785
Chromosome:chromosome 12
Location:4251340
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g519180 EFT1a,PSRP7,EFT1 Chloroplast elongation factor Ts-like protein; (1 of 1) K02357 - elongation factor Ts (tsf, TSFM) 3'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGGGTACTCGGCGTGCTCTGCCGCCA
Internal bar code:CCGGCGCACGACGACTCTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:792
LEAP-Seq percent confirming:98.4203
LEAP-Seq n confirming:2679
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGCTTTTCTCTTTGACG
Suggested primer 2:TGACTGCTTGACCTTGCATC