Insertion junction: LMJ.RY0402.089837_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089837
Chromosome:chromosome 11
Location:332708
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGACTGACACCCATTCCCGCCGAGCCCC
Internal bar code:CCATAAAATGTAAGTGCCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:73.6111
LEAP-Seq n confirming:1060
LEAP-Seq n nonconfirming:380
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACACTTTGCAGCTACC
Suggested primer 2:TTGACAGAACAAGTGGACGC