Insertion junction: LMJ.RY0402.089926_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.089926
Chromosome:chromosome 9
Location:5702441
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g401552 (1 of 2) IPR000104//IPR002893//IPR003072 - Antifreeze protein, type I // Zinc finger, MYND-type // Orphan nuclear receptor, NOR1 type 5'UTR|intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAAGCCTATGCATGCAACATAGTATTG
Internal bar code:GAGTCGAAGACGCGGTGCACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:97.5995
LEAP-Seq n confirming:3212
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCGACTTATGGAACA
Suggested primer 2:ACACGGTAGGAGGACCAGTG