Insertion junction: LMJ.RY0402.090003_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.090003
Chromosome:chromosome_16
Location:1355038
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre16.g651850 sense 5'UTR_intron

Insertion site details

Flanking sequence (orientation from cassette outwards):TGGATGGTCGCGAGCGTTACAGGCGCGCAC
Internal bar code:AGGCCAGGTCGAACGCGCCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:0.730494
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:12774
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGTTTGAAGGTCCCTG
Suggested primer 2:AGAGACGTACCGTCATTGGG