Insertion junction: LMJ.RY0402.090046_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.090046
Chromosome:chromosome 9
Location:2117391
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGCCTAGCCCGACCCACCTCGCCAGA
Internal bar code:GACGAGGGCGAAGCACTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:541
LEAP-Seq percent confirming:57.0776
LEAP-Seq n confirming:375
LEAP-Seq n nonconfirming:282
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCAGAACTCCATGATGA
Suggested primer 2:GTGTACTTCGGCACCTGGAT